The Making of a Body and a Field: Introduction to Developmental Biology

Adams, D. S. 2003. Teaching critical thinking in a developmental biology course at an American liberal arts college. Int. J. Dev. Biol. 47: 145–151.

Affolter, M. 2016. Seeing is believing, or how GFP changed my approach to science. Curr. Top. Dev. Biol. 116: 1–16.

PubMed Link

Aristotle. ca. 350 BCE. The Generation of Animals. A. L. Peck (trans.); G. P. Goold (ed.). Harvard University Press, Cambridge, MA, 1990.

Basson, C. T. and 13 others. 1997. Mutations in human TBX5 cause limb and cardiac malformation in Holt-Oram syndrome. Nat. Genet. 15: 30–35.

PubMed Link

Begon, M., J. L. Harper and C. R. Townsend. 1986. Ecology: Individuals, Populations, and Communities. Blackwell Scientific, Oxford.

Bennici, A. 2008. Origin and early evolution of land plants: Problems and considerations. Commun. Integr. Biol. 1: 212–218.

Brodersen, C. R., L. C. Roark and J. Pittermann. 2012. The physiological implications of primary xylem organization in two ferns. Plant Cell Environ. 35: 1898–1911.

Buschmann, H. and S. Zachgo. 2016. The evolution of cell division: From streptophyte algae to land plants. Trends Plant Sci. 21: 872–883.

Cadieu, E. and 19 others. 2009. Coat variation in the domestic dog is governed by variants in three genes. Science 326: 150–153.

PubMed Link

Cameron, C.B., J. R. Garey and B. J. Swalla. 2000. Evolution of the chordate body plan: New insights from phylogenetic analyses of deuterostome phyla. Proc. Natl. Acad. Sci. USA 97: 4469–4474.

Camp, E., S. Dietrich and A. Münsterberg. 2012. Fate mapping identifies the origin of SHF/AHF progenitors in the chick primitive streak. PLOS ONE 7: e51948.

PubMed Link

Cassirer, E. 1950. Developmental mechanics and the problem of cause in biology. In E. Cassirer (ed.), The Problem of Knowledge. Yale University Press, New Haven.

Churchill, A. 1991. The rise of classical descriptive embryology. In S. F. Gilbert (ed.), A Conceptual History of Modern Embryology. Plenum Press, New York, 1–29.

Conklin, E. G. 1905. The organization and cell lineage of the ascidian egg. J. Acad. Nat. Sci. Phila. 13: 1–119.

Cook, M., L. Graham, C. Botha and C. Lavin. 1997. Comparative ultrastructure of plasmodesmata of Chara and selected bryophytes: Toward an elucidation of the evolutionary origin of plant plasmodesmata. Am. J. Bot. 84: 1169.

Cretekos, C. J., S. D. Weatherbee, C. H. Chen, N. K. Badwaik, L. Niswander, R. R. Behringer and J. J.

Rasweiler IV. 2005. Embryonic staging system for the short-tailed fruit bat, Carollia perspicillata, a model organism for the mammalian order Chiroptera, based upon timed pregnancies in captive-bred animals. Dev. Dyn. 233: 721–738.

PubMed Link

Cretekos, C. J., Y. Wang, E. D. Green, NISC Comparative Sequencing Program, J. F. Martin, J. S. Rasweiler IV and R. R. Behringer. 2008. Regulatory divergence modifies limb length between mammals. Genes Dev. 22: 141–151.

PubMed Link

Darnell, D. K. and G. C. Schoenwolf. 1997. Modern techniques for labeling in avian and murine embryos. In G. P. Daston (ed.), Molecular and Cellular Methods in Developmental Toxicology. CRC Press, Boca Raton, FL, 231–272.

Darwin, C. 1859. On the Origin of Species by Means of Natural Selection, or the Preservation of Favoured Races in the Struggle for Life. John Murray, London.

Link

Darwin, C. 1874. The Descent of Man, and Selection in Relation to Sex. 2nd Ed. John Murray, London.

Link

Drost, H.-G., P. Janitza, I. Grosse and M. Quint. 2017. Cross-kingdom comparison of the developmental hourglass. Curr. Opin. Genet. Dev. 45: 69–75.

Engel, M. S. 2015. Insect evolution. Curr. Biol. 25: R868–R872.

Erwin, D. H. and E. H. Davidson. 2002. The last common bilaterian ancestor. Development 129: 3021–3032.

Freem, L. J., J. M. Delalande, A. M. Campbell, N. Thapar and A. J. Burns. 2012. Lack of organ specific commitment of vagal neural crest cell derivatives as shown by back-transplantation of GFP chicken tissues. Int. J. Dev. Biol. 56: 245–254.

PubMed Link

Friedman, W. E. and M. E. Cook. 2000. The origin and early evolution of tracheids in vascular plants: Integration of palaeobotanical and neobotanical data. Philos. Trans. R. Soc. London 355B: 857–868.

Fusco, G., T. Garland Jr, G. Hunt and N. C. Hughes. 2012. Developmental trait evolution in trilobites. Evolution 66: 314–329.

Galis, F. and B. Sinervo. 2002. Divergence and convergence in early embryonic stages of metazoans. Contrib. Zool. 71: 101–113.

Link

Garcia-Fernàndez, J. and E. Benito-Gutiérrez. 2009. It’s a long way from amphioxus: Descendants of the earliest chordate. BioEssays 31: 665–675.

Gilbert, S. F. 2017. Developmental biology, the stem cell of biological disciplines. PLOS Biol. 15: e2003691.

Gould, S. J. 1977. Ontogeny and Phylogeny. Belknap Press, Cambridge, MA.

Harholt, J., Ø. Moestrup and P. Ulvskov. 2016. Why plants were terrestrial from the beginning. Trends Plant Sci. 21: 96–101.

Harrison, C. J. and J. L. Morris. 2018. The origin and early evolution of vascular plant shoots and leaves. Philos. Trans. R. Soc. London 373B: 20160496.

Harvey, W. 1651. Exercitationes de generatione animalium: quibus accedunt quaedum de partu, de membranis ac humoribus uteri et de conceptione. London.

Holland, L. Z. 2000. Body-plan evolution in the Bilateria: Early antero-posterior patterning and the deuterostome-protostome dichotomy. Curr. Opin. Genet. Dev. 10: 434–442.

Holtfreter, J. 1968. Address in honor of Viktor Hamburger. In M. Locke (ed.), The Emergence of Order in Developing Systems. The Twenty-Seventh Symposium of the Society for Developmental Biology. Academic Press, New York, ix–xx

Hughes, N. C. 2003. Trilobite body patterning and the evolution of arthropod tagmosis. BioEssays 25: 386–395.

Huijser, P. and M. Schmid. 2011. The control of developmental phase transitions in plants. Development 138: 4117–4129.

Irie, N. and S. Kuratani. 2011. Comparative transcriptome analysis reveals vertebrate phylotypic period during organogenesis. Nat. Commun. 2: 248.

PubMed Link

Jones, V. A. and L. Dolan. 2012. The evolution of root hairs and rhizoids. Ann. Bot. 110: 205–212.

Judson, O. P. 2017. The energy expansions of evolution. Nat. Ecol. Evol. 1: 138.

Keibel, F. 1904. Normentafeln zur Entwicklungsgeschichte der Wirbeltiere, Heft IV. Gustav Fischer, Jena.

Kenrick, P. 2017. How land plant life cycles first evolved. Science 358: 1538–1539.

Klein, S. L. and S. A. Moody. 2016. When family history matters: The importance of lineage analyses and fate maps for explaining animal development. Curr. Top. Dev. Biol. 117: 93–112.

Kölreuter, J. G. 1766. Vorläufige Nachricht von einigen das feschlecht der Planzen betreffenden Versuchen und Beobachtung, nebst Fortsetzungen, 1, 2, 3.

Koornneef, M. and D. Meinke. 2010. The development of Arabidopsis as a model plant. Plant J. 61: 909–921.

Kowalevsky, A. 1871. Weitere Studien II. Die Entwicklung der einfachen Ascidien. Arch. Micr. Anat. 7: 101–130.

Kowalevsky, A. O. 1866. Entwickelungsgeschichte der einfachen Ascidien. Mem. Acad. Sci. St

Petersberg 10: 1–19.

Kowalevsky, A. O. 1867. Entwickelungsgeschichte des Amphioxus lanceolatus. Mem. Acad. Imp. Sci. St Pétersbourg 11: 1–17.

Kozlowski, D. J., T. Muramaki, R. K. Ho and E. S. Weinberg. 1998. Regional cell movement and tissue patterning in the zebrafish embryo revealed by fate mapping with caged fluorescein. Biochem. Cell Biol. 75: 551–562.

PubMed Link

Lane, M. C. and M. D. Sheets. 2006. Heading in a new direction: Implications of the revised fate map for understanding Xenopus laevis development. Dev. Biol. 296: 12–28.

PubMed Link

Larsen, E. and H. McLaughlin. 1987. The morphogenetic alphabet: Lessons for simple-minded genes. BioEssays 7: 130–132.

PubMed Link

Le Douarin, N. M. 1969. Particularités du noyau interphasique chez la Caille japonaise (Coturnix coturnix japonica). Utilisation de ces particularités comme “marquage biologique” dans les recherches sur les interactions tissulaires et les migrations cellulaires au cours de l’ontogenèse. Bull. Biol. Fr. Belg. 103: 435–452.

Le Douarin, N. M. and M.-A. Teillet. 1973. The migration of neural crest cells to the wall of the digestive tract in avian embryo. J. Embryol. Exp. Morphol. 30: 31–48.

PubMed Link

Lenoir, T. 1980. Kant, Blumenbach, and vital materialism in German biology. Isis 71: 77–108.

PubMed Link

Lenz, W. 1962. Thalidomide and congenital abnormalities. Lancet 1: 45 (reported in a symposium in 1961.)

Lenz, W. 1966. Malformations caused by drugs in pregnancy. Am. J. Dis. Child. 112: 99–106.

PubMed Link

Levin, M. and 25 others. 2016. The mid-developmental transition and the evolution of body plans. Nature 531: 637–641.

PubMed Link

Levin, T. C., A. J. Greaney, L. Wetzel and N. King. 2014. The Rosetteless gene controls development in the choanoflagellate S. rosetta. Elife 9: 3.

Li, Q. Y. and 16 others. 1997. Holt-Oram syndrome is caused by mutations in TBX5, a member of the Brachyury (T) gene family. Nat. Genet. 15: 21–29.

PubMed Link

Lillie, F. R. 1908. The Embryology of the Chick. Henry Holt, New York.

Linkies, A., K. Graeber, C. Knight and G. Leubner‐Metzger. 2010. The evolution of seeds. New Phytol. 186: 817–831.

Lucas W. J. and 15 others. 2013. The plant vascular system: Evolution, development and functions. J. Integr.

Plant Biol. 55: 294–388.

Maître-Jan, A. 1722. Observations sur la formation du poluet. L. d’Houdry, Paris.

Maldonado, M. 2006. The ecology of the sponge larva. Can. J. Zool. 84: 175–194.

Malpighi, M. 1672. De Formatione Pulli in Ovo (London). Reprinted in H. B. Adelmannm, Marcello Malpighi and the Evolution of Embryology. Cornell University Press, Ithaca, NY, 1966.

Manuel, M. 2009. Early evolution of symmetry and polarity in metazoan body plans. C R Biol. 332: 184–209.

Marlow, H. Q., M. Srivastava, D. Q. Matus, D. Rokhsar and M. Q. Martindale. 2009. Anatomy and development of the nervous system of Nematostella vectensis, an anthozoan cnidarian. Dev. Neurobiol. 69: 235–254.

Martin, M. W., D. V. Grazhdankin, S. A. Bowring, D. A. Evans, M. A. Fedonkin and J. L. Kirschvink. 2000. Age of Neoproterozoic bilaterian body and trace fossils, White Sea, Russia: Implications for metazoan evolution. Science 288: 841–845.

Martin, W. F. and J. F. Allen. 2018. An algal greening of land. Cell 174: 256–258.

Meyerowitz, E. M. 2002. Plants compared to animals: The broadest comparative study of development. Science 295: 1482–1485.

Miguel, A., J. de Vega-Bartol, L. Marum, I. Chaves, T. Santo, J. Leitão, M. C. Varela and C. M. Miguel. 2015. Characterization of the cork oak transcriptome dynamics during acorn development. BMC Plant Biol. 15: 158.

Mikkelsen, M. D., J. Harholt, P. Ulvskov, I. E. Johansen, J. U. Fangel, M. S. Doblin, A. Bacic and W. G. Willats. 2014. Evidence for land plant cell wall biosynthetic mechanisms in charophyte green algae. Ann. Bot. 114: 1217–1236.

Nakanishi, N., S. Sogabe and B. M. Degnan. 2014. Evolutionary origin of gastrulation: Insights from sponge development. BMC Biol. 12: 26.

Nielsen, C. Six major steps in animal evolution: Are we derived sponge larvae? Evol. Dev. 10: 241–257.

Niklas, K. J. 2013. The evolutionary-developmental origins of multicellularity. Am. J. Bot. 101: 6.

Niklas, K. J. and U. Kutschera. 2010. The evolution of the land plant life cycle. New Phytol. 185: 27–41.

Niklas, K. J., E. D. Cobb and A. J. Matas. 2017. The evolution of hydrophobic cell wall biopolymers: From algae to angiosperms. J. Exp. Bot. 68: 5261–5269.

Nishida, H. 1987. Cell lineage analysis in ascidian embryos by intracellular injection of a tracer enzyme. III. Up to the tissue-restricted stage. Dev. Biol. 121: 526–541.

Nishiyama, T. and 59 others. 2018. The Chara genome: Secondary complexity and implications for plant terrestrialization. Cell 174: 448–464.

Nosenko, T. and 12 others. 2013. Deep metazoan phylogeny: When different genes tell different stories. Mol. Phylogenet. Evol. 67: 223–233.

Nowack, E. 1965. Die sensible Phase bei der Thalidomide-Embryopathie. Humangenetik 1: 516–536.

PubMed Link

Ohtani, M., N. Akiyoshi, Y. Takenaka, R. Sano and T. Demura. 2017. Evolution of plant conducting cells: Perspectives from key regulators of vascular cell differentiation. J. Exp. Bot. 68: 17–26.

Ota, Y., Y. Saitoh, S. Suzuki, K. Ozawa, M. Kawano and T. Imamura. 2002. Fibroblast growth factor 5 inhibits hair growth by blocking dermal papilla cell activation. Biochem. Biophys. Res. Comm. 290: 169–176.

PubMed Link

Palovaara, J., T. de Zeeuw, and D.Weijers. 2016. Tissue and organ initiation in the plant embryo: A first time for everything. Annu. Rev. Cell Dev. Biol. 32: 47–75.

Pander, C. 1817. Beiträge zur Entwickelungsgeschichte des Hünchens im Eye. Brönner, Würzburg.

Papaioannou, V. E. 2016. Concepts of cell lineage in mammalian embryos. Curr. Top. Dev. Biol. 117: 195–198.

PubMed Link

Parker, H. G. and 16 others. 2009. An expressed fgf4 retrogene is associated with breed-defining chondrodysplasia in domestic dogs. Science 325: 995–998.

PubMed Link

Parry, L. A., G. D. Edgecombe, D. Eibye-Jacobsen and J. Vinther. 2016. The impact of fossil data on annelid phylogeny inferred from discrete morphological characters. Proc. R. Soc. 283B: 20161378.

Pinto-Correia, C. 1997. The Ovary of Eve. University of Chicago Press, Chicago.

Popper, Z. A., G. Michel, C. Hervé, D. S. Domozych, W. G. T. Willats, M. G. Tuohy, B.Kloareg and D. B.

Stengel. 2011. Evolution and diversity of plant cell walls: From algae to flowering plants. Ann. Rev. Plant Biol. 62: 567–590.

Pradeu, T., L. Laplane, K. Prévot, T. Hoquet, V. Reynaud, G. Fusco, A. Minelli, V. Orgogozo and M. Vervoort. 2016. Defining “development.” Curr. Top. Dev. Biol. 117: 171–183.

Provart, N. J. and 25 others. 2016. 50 years of Arabidopsis research: Highlights and future directions. New Phytol. 209: 921–944.

Radoeva, T. and D. Weijers. 2014. A roadmap to embryo identity in plants. Trends Plant Sci. 19: 709–716.

Rawles, M. E. 1940. The pigment forming potency of early chick blastoderm. Proc. Natl. Acad. Sci. USA 26: 86–94.

Rensing, S. A. 2016. (Why) does evolution favour embryogenesis? Trends Plant Sci. 21: 562–573.

Rensing, S. A. 2018. Great moments in evolution: The conquest of land by plants. Curr. Opin. Plant Biol. 42: 49–54.

Reverberi, G. and A. Minganti. 1946. Fenomeni di evocazione nello sviluppo dell’uovo di Ascidie. Risultati dell’indagine spermentale sull’ouvo di Ascidiella aspersa e di Ascidia malaca allo stadio di 8 blastomeri. Pubbl. Staz. Zool. Napoli 20: 199–252.

PubMed Link

Riechert, K. B. 1837. Ueber die Visceralbogen der Wirbelthiere im Allgemeinen und deren Metamorphosen bei den Vögeln und Säugethieren. In Archiv für Anatomie, Physiologie und wissenschaftliche Medicin, 120–222.

Rieppel, O. 2011. Evolutionary Theory and the Creation Controversy. Springer, New York.

Ris, H. 1941. An experimental study of the origins of melanophores in birds. Physiol. Zool. 14: 48–66.

Roe, S. 1981. Matter, Life, and Generation: Eighteenth-Century Embryology and the Haller-Wolff Debate. Cambridge University Press, Cambridge.

Rugh, R. 1950. The Frog: Its Reproduction and Development. McGraw-Hill, New York.

Schoenebeck, J. J. and 14 others. 2012. Variation of BMP3 contributes to dog breed skull diversity. PLOS Genet. 8: e1002849.

PubMed Link

Sears, K. E., R. R. Behringer, J. J. Rasweiler IV and L. A. Niswander. 2006. Development of bat flight: Morphologic and molecular evolution of bat wing digits. Proc. Natl. Acad. Sci. USA 103: 6581–6586.

PubMed Link

Shubin, N. H., E. B. Daeschler and F. A. Jenkins Jr. 2006. The pectoral fin of Tiktaalik roseae and the origin of the tetrapod limb. Nature 440: 764–771.

Shubin, N. H., E. B. Daeschler and F. A. Jenkins Jr. 2014. Pelvic girdle and fin of Tiktaalik roseae. Proc. Natl. Acad. Sci. USA 111: 893–899.

Steinmetz, P. R. H., A. Aman, J. E. M. Kraus and U. Technau. 2017. Gut-like ectodermal tissue in a sea anemone challenges germ layer homology. Nat. Ecol. Evol. 1: 1535–1542.

Thorogood, P. 1997. The relationship between genotype and phenotype: Some basic concepts. In P.

Thorogood (ed.), Embryos, Genes, and Birth Defects. Wiley, New York, 1–16.

Toms, D. A. 1962. Thalidomide and congenital abnormalities. Lancet 2: 400.

Vervoort, M. 2014. Comparison of animal and plant development: A right track to establish a theory of development? In A. Minelli and T. Pradeu (eds.), Towards a Theory of Development. Oxford University Press, Oxford.

Vogt, W. 1929. Gestaltungsanalyse am Amphibienkeim mit örtlicher Vitalfärbung. II. Teil Gastrulation und Mesodermbildung bei Urodelen und Anuren. Wilhelm Roux Arch. Entwicklungsmech. Org. 120: 384–706.

von Baer, K. E. 1828. Entwicklungsgeschichte der Thiere: Beobachtung und Reflexion. Bornträger, Konigsberg.

Weatherbee, S. D., R. R. Behringer, J. J. Rasweiler IV and L. A. Niswander. 2006. Interdigital webbing retention in bat wings illustrates genetic changes underlying amniote limb diversification. Proc. Natl. Acad. Sci. USA 103: 15103–15107.

PubMed Link

Weismann, A. 1875. Über den Saison-Dimorphismus der Schmetterlinge. In Studien zur Descendenz-Theorie. Engelmann, Leipzig.

Wickett, N. J. and 41 others. 2014. Phylotranscriptomic analysis of the origin and early diversification of land plants. Proc. Natl. Acad. Sci. USA 111: E4859–E4868.

Wilson, E. B. 1923. The Physical Basis of Life. Yale University Press, New Haven, p. 10.

Winsor, M. P. 1969. Barnacle larvae in the nineteenth century: A case study in taxonomic theory. J. Hist. Med. Allied Sci. 24: 294–309.

PubMed Link

Winter, R. M. 1996. Analysing human developmental abnormalities. BioEssays 18: 965–971.

PubMed Link

Wolff, K. F. 1767. De formatione intestinorum praecipue. Novi Commentarii Academine Scientarum Imperialis Petropolitanae 12: 403–507.

Woo, K. and S. E. Fraser. 1995. Order and coherence in the fate map of the zebrafish embryo. Development 121: 2595–2609.

PubMed Link

Zangerl, R. and M. E. Williams. 1975. New evidence on the nature of the jaw suspension in Paleozoic anacanthus sharks. Paleontology 18: 333–341.

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